YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TATB_PSYCK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDIGFSELL LFGVIALIVL GPEKLPQAAR TAGQWYAKIR RTVSTLQSEI EAELDLAETR  60
   61 QQMQKELAKI RQTEAEMRRE MAEMRGSMQE FESSKNQHLK ASRDLVDDAK PRQSSQGSSE 120
  121 NDDNRPVSPK SFDYAYDNNR QAEKPESSEQ PSAQGDNDSL KTDFNDNANP VIQTITTRPW 180
  181 ENMWFRLGAY DKARRLPQPP YLPNYKADIL LNSHIDSLLP KQASVNEQES H

Type	Start	End	Confidence
Signal Peptide	1	28	0.75
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	231	0.95