YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71162257, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGIENYLGF ILAAILLNIT PGTDSMYIIT RSMSQGQTAG FYSVFGIISG ILVHTLLAAL  60
   61 GLSVLLANSP FAFTLVKYIG ASYLCYLGFK MLTSKPAPLL ASNLPIEEKL ASTRPLDRWQ 120
  121 IYKQGVITNT FNPKVALFFL AFFPQFIDSS YGNSMLSFLG LGLTFATTGF MWFSCLALLS 180
  181 SKFSENLRKN PTIEVILNRI SGVIFIGMGV KLLTEKG

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.80
Transmembrane Helix	7	29	0.87
Cytoplasmic	30	38	0.79
Transmembrane Helix	39	62	0.87
Non-Cytoplasmic	63	70	0.59
Transmembrane Helix	71	89	0.77
Cytoplasmic	90	125	0.82
Transmembrane Helix	126	147	0.75
Non-Cytoplasmic	148	155	0.82
Transmembrane Helix	156	179	0.88
Cytoplasmic	180	194	0.90
Transmembrane Helix	195	214	0.73
Non-Cytoplasmic	215	217	0.71