YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|254239117, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSLPQAAR SVRSSRSTTL TTTAVVLAGI APLGNAAGFL EDSKASLETR NFYMNRDFRD  60
   61 GPGQSKREEW AQGFILNLQS GYTQGTVGFG LDAMGMLGVK LDSGRGRSGT GLLPKDSDGR 120
  121 APDTYSKLGL TAKVKVSQSE LKVGTLIPKL PSVQPNNGRI FPQIFEGALL TSKEIKDLGF 180
  181 TAGRLEKTKI RDSSDSEDLA LNDKNGRFAG VSADHFDLGG LDYKLTDQLT ASYHYSNLQD 240
  241 VYRQHFVGLL HSWPIGPGEL TSDLRFARST DSGSAKAGGI DNKSLNGMFT YSLGNHAFGA 300
  301 AWQRMNGDDA FPYLEGSNPY LVNFVQVNDF AGPKERSWQL RYDYDFVGLG IPGLTFMTRY 360
  361 VKGDNVELAG QRGEGREWER NTELQYVFQS GALKNLGIRW RNATFRSNFT RDIDENRLIV 420
  421 SYTLPIW

Type	Start	End	Confidence
Signal Peptide	1	36	0.98
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	427	0.99