YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67530726, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISHRRRCN PHYCLDGFMD IAHDLQSIGA QEQALVFPQF DPARAWALGN RMHALATARG  60
   61 HAIAIDIATF GQPLFFAALA GATPDNADWV RRKRNVVAHF RRSSYAIGLR MQQAGATLAD 120
  121 KHGLPISEYS PHGGSFPLTV AGAGVIGSIT ASGLPQRADH EFVVEALCAE LGHDYAVLAL 180
  181 ERS

Type	Start	End	Confidence
Cytoplasmic	1	59	0.69
Transmembrane Helix	60	80	0.63
Non-Cytoplasmic	81	132	0.88
Transmembrane Helix	133	154	0.62
Cytoplasmic	155	183	0.64