YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67547666, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSSDGTAT KRSLAAHEQA VEVVQRQLIP RRSAVIALIG ALGRFHLPQQ RVHLVERQAP  60
   61 VRAHRVVTRE RAEQLVLALG EHARAAERMQ IGQHRAGERL QVGILQQRGH RADRERRRRQ 120
  121 HREIEAERFE RVALFLDGAD LDRRRRHRYR QQQRLHGDRA IGERVLELLV ENSFVGRVHV 180
  181 DDHEAVRVLS EHIDPVDLAE CEAERLLVVR GGRERHGGEA GQRGARRVGW IGGIACDQRR 240
  241 AVGRVLAAEQ RVVERERLCD RQRALRHARL THPRAAGRRG GRSGRSGRSG RSGRGARRRT 300
  301 ERSRRREARR ARARRAALTE RRIAERGGLA WRGFEVRGVA AGGRVRRRAR MARERALHRV 360
  361 EHVLVDRARI AEAHFDLRRM HVHVDGFRRQ VEEQHVGRIA VAVQHVLIRG AHRVREQLVA 420
  421 HEAAVHEEVL LVRAAAARGR QAGAAVYGQR PGPFVERQVR GREAVAEDLR DALRRLARVP 480
  481 VLDGLAVVQH RDRDVRARER RAADHFDAVA ELGLLAFQEF AARGRVEVQL AHLDRRADRA 540
  541 GGRRQRAGRR VDLRRMRDVG RAAGDRQLGD RRDRRQRFAA KTERRHGLEL FERADLAGRV 600
  601 AHQRERQLVG RNAAAVVGDR DALDAAFLEH DAQRARAGVH RVLEQFLDDR RRALDDLAGR 660
  661 DLADQLVGQR LDRAQAARGR GGRVARDRLG DFGHGRIIAT RRRRAGAAGR YVFSRSLKVV 720
  721 SVSWGSVARA ALSGGRSRLF RPVRPFAFEE SHLDTLLHFV NLVLHIDAFL GDFIRQYGAW 780
  781 VYLVLFLIVF CETGLVVLPF LPGDSLLFIG GAFAATGDMN VGALIALLLV AATAGNTVNY 840
  841 LIGRWIGPKV FNTHIPVLER FLDRAALQKT HSFYDKHGGK TIVLARFIPV VRTFAPFVAG 900
  901 ASAMSFTRFQ LFNVIGALLW VLLLVLLGYF FGNIPFIRQY LNVIVLAGIG AAVVPVALGA 960
  961 LWKLVRGRQS GSTQKTGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle