YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67546254, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRSDADACA NGACSPIMTN IGERRKPGRL RVKPVNWCEN CNATDTMLIN CAAYQDGRKL  60
   61 ADIDIEAISD YVSKPECFVW VALKEPTPDE IDLMGEEFGL HELALEDARK GHQRPKIEEY 120
  121 GDSLFAVLHT VELDDDGEFK VGELNVFVGP NYVLSIRNHT EQDFRDVRKR CEREPHLLRE 180
  181 GSAFVFYALM DQVVDRYFPI LETLGAELEE LEDRIFAKAT PAASRAIIED LYSLKRRLVT 240
  241 LYQHTAPLME PLAKLTGGRI PQVCSGMQHY FRDVYDHLQR IVKTIEGRRE MVVTAIQVNL 300
  301 GMISLAENEV TKRLGSFAAL FAIPTMIAGI YGMNFANMPE LHLKYGFYGC IAAMAVADLA 360
  361 LWWRFKRAGW L

Type	Start	End	Confidence
Cytoplasmic	1	313	0.86
Transmembrane Helix	314	335	0.89
Non-Cytoplasmic	336	344	0.69
Transmembrane Helix	345	365	0.92
Cytoplasmic	366	371	0.86