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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67545660, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLVASMIV DATLGVGSAA GRAARARYRA LAMGPSPYRA ADGRRERCRV PVRGSGDGLR  60
   61 VASRRRRAVR GNASRPARST CEPPSTTSSG EPPCPPRCAA LPASRPSRPR CSSRASRCRP 120
  121 PHTRIARRPV TAAKRISTGT TRTAIATATP CMRPRIRDRA ACPTARAHVA ATARTASAAI 180
  181 GAARVRGTAA SPHGCEGGSA EWPAPRQRQA AAKYNTRSRR RHAAPRPRRA PRAPYRLIRR 240
  241 HARPCAARQS QPSDFHTQMA QYVFTMNRVG KIVPPKRQIL KDISLSFFPG AKIGVLGLNG 300
  301 SGKSTLIRIM AGVDKDIEGE ATPMPNLNIG YLPQEPQLDP TKTVREAVED GLGDLFQANK 360
  361 KLEEIYAAYA EPDADFDALA AEQAKYEAIL ASSDGGSPEQ QLEVAADALR LPPWDAKIEH 420
  421 LSGGEKRRVA LCKLLLEKPD MLLLDEPTNH LDAESVDWLE QFLVRFPGTV VAVTHDRYFL 480
  481 DNAAEWILEL DRGHGIPWKG NYSSWLDQKE ERLKQEEASE SARQKAIKKE LEWVRQNPKG 540
  541 RQAKSKARIA RFEELNSQEY QKRNETQEIF IPVGDRLGNE VIEFKNVSKS FGDRLLIDNL 600
  601 SLKIPAGAIV GIIGPNGAGK STLFKMLTGK EQPDSGEVVL GPTVKLAYVD QSRDALDGSK 660
  661 TVFEEISGGA DVLTVGKYET PSRAYIGRFN FKGGDQQKIV GNLSGGERGR LHLAKTLISG 720
  721 GNVLLLDEPS NDLDVETLRA LEDALLEFAG SVLVISHDRW FLDRIATHIL AFEGDSQVTF 780
  781 FDGNYQEYEA DKRARLGEEA AKPKRLRYKP ISR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle