YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67533793, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVPRRPLR RRRRRGARLE LSARPLRRTG LWCARRCSSA KPNPAQLGPD RYPPVGQSAP  60
   61 PLLYSAPPGD GPGPFASTGT TPSDPEYVEM AWVLLLIAGL LEVAWAAGMK SSEGFTKLGP 120
  121 SVFTIVTALA SFALLAIAMR QLPLGTAYAV WTGIGAVGAF AFGIVMLGEA LTVARVASAA 180
  181 LIVLGLVGLK LSSGA

Type	Start	End	Confidence
Cytoplasmic	1	89	0.72
Transmembrane Helix	90	109	0.89
Non-Cytoplasmic	110	117	0.57
Transmembrane Helix	118	138	0.93
Cytoplasmic	139	146	0.54
Transmembrane Helix	147	167	0.92
Non-Cytoplasmic	168	170	0.60
Transmembrane Helix	171	193	0.83
Cytoplasmic	194	195	0.63