YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67544650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVQYSAPRA PVHRCAEQWN LRSARWSIAV RQQLNGNREA FMLQFIETLV VGLIVGLLAR  60
   61 AFKPGDDKMG ILMTIVLGVV GSLIAGYVGR AAGWYAPGQG AGWIASIVGA IVLLVIVGAV 120
  121 RKRAG

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.86
Transmembrane Helix	40	62	0.80
Cytoplasmic	63	69	0.88
Transmembrane Helix	70	91	0.92
Non-Cytoplasmic	92	99	0.77
Transmembrane Helix	100	120	0.94
Cytoplasmic	121	125	0.87