YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83858677, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGLSVAAAV SACAAPVRAP APIEHGGSGA ARAQGGCGRS LTVQSGDTLY AIAQRCGVSL  60
   61 ADLAAENGLR EPYTLQRGQT VRLPGPSVYT VRRGDNLYRI ALAHGMSTEE LARLNSLRQP 120
  121 YTIYPGQELA VRGQARSVVA QAQPASSGAS AQPSAPTRRA SPPPRASTAN APSFQWPLLG 180
  181 QVITPYGGAE GARIDGIRIA ARLGDPVRAA ADGEVVYAGN ELQGYGELVL IRHENNWVTA 240
  241 YGLNSILRVN VGDRVTAGQH IADAGASGSE TRTALHFEVR RGVSPVDPMQ VLPSR

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	295	0.99