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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83857085, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLFIVFAV AMGVGTFVES YYSTETARQY IYNAHWFEVI MVLFAINFFG NIFRYNLHKR  60
   61 EKWSTLLLHM SFVLIIVGAG ITRYIGFEGI MPIREGQATN KFMSEKTFLT FMIDGEVDGE 120
  121 ALRRRKSEEL LLAPKGNNDI TINTDFKGDP ISFKVVNYIH GAEEGFRETE DGSNYIKIVE 180
  181 AGGGNRHDHF IKEGEVVSIH NVLFAYNKPT DGAINITVPE DGSDYLIKTP FEGDFMRMAD 240
  241 QFKGEVLKDS VQKLNLRSLY NVAGMQFVFP DPVVKGEEGI VETEQKSKGQ ADAVTLEVKA 300
  301 NGDTKNIQLL GSKGRMPDPK KLEVGGYDIY LSYGSKEYEL PFALMLKDFE AKKYPGTENN 360
  361 PTPSYQSFKS KVDIVDDGES VPYEIYMNHV LDKDGYRFFQ ASFDADEKGT ILSVNHDFWG 420
  421 TWITYIGYFL LYLGLMLILF DKGSRFGQLK KMLDKVKAKK QALTILLVLS TALGFAQTTD 480
  481 DGHDHSDPNH VHEDVQEIDQ ERLDSLIVAN AVSKEHAEEF GKMIIQDAGG RMKPANTYSS 540
  541 ELLRKLSKAD SYNGLTSDQV LISMLENPTV WYNIPLIHVE RKNDSIRHIT GVDEDAKLLP 600
  601 LAKFFDATGT YRLAPYLEDA YQAQNPTSFQ KDFIKTDQKV NLLYSALEGD LLKIFPVPGA 660
  661 ENNKWVSYPE LKEHSFTGRD SVFAYNALPI YLTTLRQAKQ TQGYAQATEV LETIKKFQSN 720
  721 HGAEIMPSDQ KVKTEILYNK YDVFRNLFWM FMLAGLITLL FVILKIFYNN KFIKSLVLIG 780
  781 KIAIILLFII HTAGLIARWY ISGHAPWSDA YESMIYVAWA TMFFGLAFGR KSDLTLASTA 840
  841 FVASMILMIA HWNWMDPAIA NLVPVLDSYW LMIHVAVIVG SYGPFTLGMI LGVVSLLLMI 900
  901 FTNSNNKAKM KLNIREITII TEMALTVGLV MLTIGNFLGG QWANESWGRY WGWDPKETWA 960
  961 LISIMVYAFV IHMRLVPGLR GRWFFNFMSI VAFASIMMTY FGVNFYLSGL HSYASGDKVI1020
 1021 TPDFIYYSIA VVVILGALSY WKYKKHYYKG DYNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle