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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|161648989, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLENFRAHVA ARAALGIPPL PLTAQQTAEL VELLTNPPAG EEQTLLDLIT HRVPAGVDEA  60
   61 ARVKAGFLAA VAKGETACPL ISRERATELL GTMLGGYNIQ PLIELLSDEA VASVAADALK 120
  121 KTLLMFDQFH DVKELADKGN AHAKAVLQSW ADAEWFTSRP EVPESLTITV FKVTGETNTD 180
  181 DLSPAPDATT RPDIPMHALA MLKNARPGIT PEEDGKRGPV KFIESLKEKG HLVAYVGDVV 240
  241 GTGSSRKSAT NSVLWFTGQD IPFVPNKRFG GVCLGGKIAP IFYNTMEDAG ALPIELDVSQ 300
  301 MNMGDVVELR PYEGKALKDG KVIAEFQVKS DVLFDEVRAG GRIPLIIGRG LTAKAREALG 360
  361 LQPSTLFRLP HQPADTGKGF TLAQKMVGRA CGLPEGRGVR PGTYCEPKMT SVGSQDTTGP 420
  421 MTRDELKDLA CLGFSADLVM QSFCHTAAYP KPVDVKTHQT LPNFISTRGG IALRPGDGVI 480
  481 HSWLNRMLLP DTVGTGGDSH TRFPIGISFP AGSGLVAFAA ATGTMPLDMP ESVLVRFKGK 540
  541 MQPGVTLRDL VNAIPLYAIK QGMLTVAKQG KKNIFSGRIL EIEGLPDLKV EQAFELSDAS 600
  601 AERSAAGCTV RLNKEPIIEY LHSNITLLKW MIAQGYQDAR SLQRRIAAME QWLADPKLLS 660
  661 PDADAEYAAV IEIDLADVHE PIVACPNDPD DVKTLSEVAG AKIDEVFIGS CMTNIGHFRA 720
  721 ASKLLEGKRD IPVKLWVAPP TKMDQKQLTE EGHYGVFGTA GARTEMPGCS LCMGNQAQVR 780
  781 EGATVMSTST RNFPNRLGKN TNVYLGSAEL AAICSRLGRI PTKEEYMADI GVLNANGDKI 840
  841 YKYMNFDQIE DFKEVADTVQ M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle