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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134135594, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRASSTLLW TAVALLGAFA FGTIALAHGE RVSALWIVIA AVCVYLIAYR FYSRFIASKV  60
   61 MQLDGLRMTP AVKYNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYTPGMLWI 120
  121 LGGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL 180
  181 IVVKALTNSP WGTFTVAATI PIALFMGIYT RYIRPGRIGE VSIIGFVLLM ASIAFGQAVH 240
  241 DSPTLAAWFT FSGTQLTWIL IGYGFIASVL PVWLLLAPRD YLSTFLKIGT ILGLAIGILV 300
  301 VAPELKMPAL TKFVDGTGPV WSGNLFPFLF ITIACGAVSG FHALISSGTT PKLIDNETNA 360
  361 RFIGYGAMLM ESFVAIMALV AACVIEPGVY FAMNAPAAVL GSTPEAVANT VTQWGFVLTP 420
  421 DMLTQTAKAV GETTIIARAG GAPTLAVGMA HILHQVIGGE AMMAFWYHFA ILFEALFILT 480
  481 AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLVATALC VAAWGYFLYQ GVVDPLGGIN 540
  541 TLWPLFGISN QMLAAIALVL GTVVLFKMKR ERYAWVTIVP TAWLLICTLT AGWQKIFDAN 600
  601 PKVSFLAHAA KLQASVDQGK VLAPAKSLAQ MKRIIFNDYV DAALAGLFIF VVVAIAVYGL 660
  661 LAVLRARREA KPSVRETPYE PMPAAQALGS GR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle