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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121602426, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFETVVSV KTRLNKTPKK KIIKNLLIIL ALFIFWFSYK WLTNWRYMLT TDDAHLQGDI  60
   61 AAIATKLNGY IQDIPVDANQ AVKKGDVLFH LKRDDYQNSL DQAEANLNTQ QKTLMRIDAQ 120
  121 ITAARSALDE ARAQKDAASA VATNAKLTLE RATQLKADSY VAQSNVDNAK SAYEQAVANV 180
  181 TRTDAQIAAA RANIRILEAQ QDEVKSQTKS LELMRDKAEY DLNSTTLHAP FDGIIGNLTA 240
  241 KTGDFVVNGQ RLAALVPTHV LYVDANYKET QLKNIHSGQT AYVTVDAFKN EVLKGTVLSI 300
  301 SPATGAIFSL LPPQNATGNF TKITQRVPVR IAIPADALKS GRFRAGMSVS VTIDTRTQPH 360
  361 DKKSFIKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle