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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83748236, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRGVSAYGD LGMSKLSFRQ KLWLPLAFSL IALTLLSVFY AYQARGIRIE ERKNNLVSVT  60
   61 SMALNLVKQY DDLVRGGVLT KEEAQKQALE RFRALRYDKD GYFTITRSDN VVVMHPIKPE 120
  121 FIGKDQSGFK DAQGNSVYVN LTGAARQPNG GFTSYVWPHV GGTELVPKTA YALRYEPWDW 180
  181 VFSTGAYMDD INAAFMTSLY ESGGLLLLAG TVLVLLAGVA NRGLQRTLGG DPAYAAEVAN 240
  241 RIAGGDLSVE IATRPDDRDS LLYAMGRMRG ALVQTIGRIR GASETIGTAT REIASGNLDL 300
  301 SSRTEQQASS LEETASAMEE LMSTVQQNAD NANQANQLAV SASDVAVRGG DVVSRVVETM 360
  361 GSINASSRKI VDIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAG EVRSLAQRSA 420
  421 AAAKEIKALI DDSVTNVDAG STLVEEAGTT MREIVASVRR VTDIVGEITA ASQEQRSGIE 480
  481 EVSHAVTQLD DATQQNAALV EQAAAAAQSL QEQADSLTQV VAQFRLDPTM PTVPAVRHVV 540
  541 AKAEPVIAAP AARAVEAASV ASVAPVSVPA QAAQAAQAAR REPVKPSAEA AKPKLQPRKA 600
  601 PVLAKRTAKP AVAPAPVPAE SPKPDKPKPQ PLVAAGDAAD WETF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle