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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|207723996, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNNWFQKAA IWLVIALVLF TVFKQFDKPR AQEGVTYSQF MDDAKGGKIK RVEVQGRNLL  60
   61 VTPNEGNKYT IISPGDIWMV GDLMKYGVQV TGKAEEEQGV LLSALYYLGP TLLIIVFWFY 120
  121 MMRQMQGGGK GGAFSFGKSR ARLIDENNNS VTFADVAGCD ESKEEVVELV DFLKDPQKFQ 180
  181 KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE 240
  241 NAKKQAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN 300
  301 RADVLDKALL RPGRFDRQVY VGLPDIRGRE QILKVHMRKV PIGNDVDASV LARGTPGFSG 360
  361 ADLANLVNEA ALFAARRNKR VVDMQDFEDA KDKIYMGPER KSAVIREEER RATAYHESGH 420
  421 AVVAKLLPKA DPVHKVTIMP RGWAGGLTWQ LPEHDKHYAY KDTMLEEIAI LFGGRAAEEV 480
  481 FLAAMSTGAS NDFERATKMA RDMVTRYGMS DSLGTMVYVD TEQDGFFGRM SSKTVSEATQ 540
  541 QKVDSEIRRI VDEQYALAKR LLEENRDKVE AMTAALLEWE TIDADQVNDI MAGKPPRPPR 600
  601 YGSSGGGSTP PNGGTPAGVT PGNVPATA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle