YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83746174, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRPTHIPAD PDSRSCTRNH QSRRMNPAEV TQDLSIVSLV LHASLLVQFV MGLLLVMSLF  60
   61 SWTYIFRKAF ALRAARSQTE SFERDFWAGG DLQAMYQSAA NNRHHTGALE RIFEAGMREF 120
  121 LKTREQQRGI GDPSAILDAS RRAMRAAYQR EMDSLESHLP FLASVGSVSP YIGLFGTVWG 180
  181 IMNAFRGLSN VQQATLSAVA PGIAEALVAT AIGLFAAIPA VIAYNRYATE MDRLANRFES 240
  241 FMEEFSNILQ RQTR

Type	Start	End	Confidence
Non-Cytoplasmic	1	44	0.93
Transmembrane Helix	45	66	0.94
Cytoplasmic	67	158	0.98
Transmembrane Helix	159	181	0.90
Non-Cytoplasmic	182	202	0.86
Transmembrane Helix	203	224	0.90
Cytoplasmic	225	254	0.94