YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83727492, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRPSRRLRE SAATMLKNGR FLEPPRARRI TTMDLFLEKL GMRTEKHASI AQFSRPNKHL  60
   61 DRTRLNAGYA AWHARYGRWV IVLAAWLGCA LPATARLPIE TLRVPPGFQV ELLTDAMPSA 120
  121 REMALSPAGI LYVGSRTAGK VYALPLQTPG AAVRVIASGL EQPVGVAWRD GSLYVSAVSR 180
  181 VMRLDRIDTR LDDPPAPVVV NDRFPTETHH GWKFIAFGPD GKLYVPVGAP CNVCHRDENR 240
  241 YANLMRMNAD GSGLEVVARG IRNTVGFDWH PVTHELWFTD NGADMMGDDV PDDELNRITA 300
  301 PGQHFGYPFC HAGDVPDPEF GAGHPCSQYV PPVGKLGAHV AALGMRFYTG SSFPQAYRHN 360
  361 IFIAEHGSWN RSSKVGYRVV RVALDATGKI VRHEPFVEGW LRGQQAWGRP ADVVVAPDGS 420
  421 LLVSDDYAGA VYRVRYTGK

Type	Start	End	Confidence
Cytoplasmic	1	75	0.80
Transmembrane Helix	76	95	0.75
Non-Cytoplasmic	96	439	0.98