YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207743639, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIKDVAAL AGVSFTTVSH VINNTRPVNA ETRKRVEEAI RATRYVPSAV ARSLKHRTTR  60
   61 TIGVLVPTAT NPYFAELARG IEDVCAAAGY SVILCNSDDD PRKQRDYLRV LMEKRVDGLI 120
  121 VSSAGPDTAL IDALSESALP VVMVDRPTEG ILADQVQIDH EEGAYLATRH LVELGHRRIA 180
  181 CISGPSTLSV TAGRLAGFHR ALREAGVPEQ STRVSEGDFT SPGGYRAARE LLTTGERPTA 240
  241 IFASNDLMGI GALRAAAELG ITVPRELSII GFDDIELSRY VYPALSTVGQ SIRQLGETTA 300
  301 STLLEHLTDN AARHHHPVPE EPRRIVLPPR LSLRESTAEP ARPARAA

Type	Start	End	Confidence
Signal Peptide	1	19	0.52
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	347	0.99