YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|253975158, gi...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQQRGFILL EMMLVLALVA ITASVVLFTY GREDVANTRA RETAARFTAA LELAIDRATL  60
   61 SGQPVGIHFS DSAWRIMVPG KTPSAWRWVP LQEDAADESQ NDWDEELSIH LQPFKPDDSN 120
  121 QPQVVILADG QITPFSLLMA NAGTGEPLLT LVCSGSWPLD QTLARDTRP

Type	Start	End	Confidence
Cytoplasmic	1	6	0.33
Transmembrane Helix	7	30	0.56
Non-Cytoplasmic	31	169	0.70