YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83571492
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWQTKLPLI AILRGITPDE ALAHVGAVID AGFDAVEIPL NSPQWEQSIP AIVDAYGDKA  60
   61 LIGAGTVLKP EQVDALARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALEA 120
  121 GAQALKIFPS SAFGPQYIKA LKAVLPPDIA VFAVGGVTPE NLAQWIDAGC VGAGLGSDLY 180
  181 RAGQSVERTA QQAAGSRQQA AGSRQQAAGS RQQHLLRRIE RQCNENHQNY HVSFTSPLDV 240
  241 PEN

Type	Start	End	Confidence
Signal Peptide	1	23	0.51
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	243	0.99