YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83570871
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTELVDL AVIFPDLEIE LKYACADNIT GKAIYQQARC LLHKDAITAL AKSISIVQLS  60
   61 GLQLVIYDAY RPQQAQAMLW QACPDPQYVV DVTVGSNHSR GTAIDLTLRD EHGNILDMGA 120
  121 GFDEMHERSH AYHPSVPPAA QRNRLLLNAI MTGGGFVGIS SEWWHFELPL AAS

Type	Start	End	Confidence
Cytoplasmic	1	144	0.84
Transmembrane Helix	145	166	0.81
Non-Cytoplasmic	167	173	0.94