YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83569294, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIKIGLAL GSGAARGWSH IGVINALKKV GIEIDIVAGC SIGSLVGAAY ACDRLSALED  60
   61 WVTSFSYWDV LRLMDLSWQR GGLLRGERVF NQYREIMPET EIENCSRRFA AVATNLSTGR 120
  121 ELWFTEGDLH LAIRASCSIP GLMAPVAHNG YWLVDGAVVN PIPISLTRAL GADIVIAVDL 180
  181 QHDAHLMQQD LLSFNVSEEN SENGESLPWH ARLKERLGSI TTRRAVTAPT ATEIMTTSIQ 240
  241 VLENRLKRNR MAGDPPDILI QPVCPQISTL DFHRAHAAIA AGQLAVEKKM DELLPLVRTN 300
  301 I

Type	Start	End	Confidence
Signal Peptide	1	17	0.95
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	301	0.99