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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83375265, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGWPKPRA ACHEPAPPHP RRSGRRSFGP GPARRPGTCG RGSAFRPGPG RCGRTAVSRI  60
   61 DMGQGAGHVP CAPAAGASPL GGARPAPRGS GGGGGAFGGG GHARSRLGGH RGRARRADLH 120
  121 HRRGGGGGAG AAHDPRRAGG RGAGAFRRRH AGRDAEPARR SGHPRRQCGC CHGSGRGHGL 180
  181 VRDRDPLGLS RHGDPRRERR GGARLHDGVA RARRGHAAQA RAGRSRHLDR GLLADDGDPA 240
  241 AAQRHRGQRA GLAGGGRGRC HARCDPGPHA RPPRGAGAEP PLRAHPEHPC PRRRCSGGPR 300
  301 PLRRAEPPRR GGGGGSPVRR GHGDLRPHRL RGPRCAASLP PPLRGRSPLA LALRGDGRRA 360
  361 SADARRCAGP DPRPSGRAGR GHRHGLRGRA GLHLDRAATE DPRAVIPAPS LAAEVAAHRR 420
  421 RRLRRGAALV LVLALLILAS VALTLSVGST PVAPLDVLRV LAGQEVPGAS FTVERLRLPR 480
  481 AVLSLLAGLC FGLGGAACQT LLRSPLASPD IIGISAGSGA AAVFAIVVLG WSGPAVSGAA 540
  541 ILCGLATALA IYLLAWRDGV AGARLILVGI GISAMLQSVT AYLLLRAPDW SLQEAMRWMT 600
  601 GSVNGARLSD APPLLLALGL FGTLLLCQSR ELEALRLGDD KAAALGVRIA RTRLLILVGV 660
  661 VGLTAVATAV AGPIAFVAFL AGPIAARLGM PGRPILLPAA LIGALLVLLA DFAGQVLLPG 720
  721 RYPVGIVTGA LGAPYLIYLI VRVNRAGGTI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle