YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69953605, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEYMEFFKA NPMLSLAWVG LFVALVVSVI KSGTSKVKNV SHQELTLMVN KQDAKLVDVR  60
   61 GKEEFKKGHI VDSLNVTLSE IKNNQVTSLE KFKTSPIILV CNSGMTSGQA AQLLTKQGFE 120
  121 NVFNLKGGMG EWQGANLPVV KSKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.47
Transmembrane Helix	14	34	0.79
Cytoplasmic	35	144	0.50