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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114334091, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.72
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLPIGLRAK VVILSLFLLC LPWLGYEYVW EMEKYLRYGQ EKTLEGTTQA LATALHERPK  60
   61 LFDNQASFLN QVEKGRDLYA YPLAGPIQLD GKLSDWDLYQ HRTLSYSDKH VIYQRSETEP 120
  121 IDISFSHMVG KYGGYLYGFF NVNDPNLIFR NRKSLRIDRN DHLVMATQSP DGQFRRYIIA 180
  181 NTKSGWLSAF ELPADPSQSM PVTPESRIQG QWLKTAKGYN IEFRLPLEMV GSKLGFAIHN 240
  241 VNDTKTRQLV NVIGTSATDS VASLGTVLVP SPEIENIIKG MSHNSSRIWV VDNHGRVLAK 300
  301 SGDIRSSSNT WADDIEVNQP DSFWLHFKQQ YILPLYYKIL TRPPQDFIDS LQDSTELTGS 360
  361 HIEKALSGKQ GSTWRLTPDN KAVVLAAASP IWIDDKVMGV VIAEETTHGI RSLRNRALEK 420
  421 LFNVILTIMS MGTLALFIFA SSISSRIRRL RDQAELAIDS QGRVRQQIVA SKNRDEIGDL 480
  481 SRSFSSIVSR LGQYTHYLEN MSSRLSHELR TPVAVVRSSL EHLGLQQLDE QSQKYVSRAQ 540
  541 EGVSRLHLIL NNLSEATRLE ASLTQAESCR FSLKKVISGC MQGYQITYPD QLFAVHIEDK 600
  601 VMSCDGVPEY IAQLMDKLIN NAIEFHQPDS AITVSLTQYH KQAILKVSNI GPLLPKDMNS 660
  661 QIFESMVSIR PQGINGKPHL GLGLYIARLV TDFHHGSIKA TNMIENGIEG VEICLTLPLS 720
  721 DEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle