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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69164088, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKPHLLTHR SIIAKAVTTS MMALALSACS PADTQVNTQA QVVNVAPGTP GTEPTWAFSG  60
   61 KTGIGTSYEP YVNGNYQDTA ANPVSKVWFS IAQGVLTETM FGLIHNAQLK ELQFIISGKG 120
  121 FVDTEKSNTI STIEYLDTDD MGRPLSLAYK VINKDVEGKY QIEKHIFTDP DRNSLMMKVT 180
  181 FTAFEAGITP HLYVNPHIDN SGANDIASVE GQSLVAYTSD TNSTVMTVKT DVDFVAASAG 240
  241 FVGTSDGIVD LQDNGKLDYH YQTTSDTNQG GNVALTAQYP TLANVNDSLS FNLVIGFGKD 300
  301 KASSLATTQA TLDAGYDAVK QAYLGDDKHL GWKDYLASLK PLNDMSSNTT DNGKLLYASA 360
  361 LVLKAQEDKT HAGALIASLS NPWGDTVSAK VGSTGYKAVW PRDFYQCAMA FLAMGDTQTP 420
  421 KVAFEYLKQV QVQQQTPGFA GTPGWFLQKT HVDGEIEWVG VQLDQTAMPI MLGWKLWQAG 480
  481 VLNNTEITQW YNDMLKPAAN FLVKGGNVKL DWNDTKITPP STQQERWEEQ AGFSPSTTAA 540
  541 VIAGLVAASD IGALAKDEQA PEYADLARKL QRQLETTMAT TTGLLGQTDS KGKVAPYYVR 600
  601 ISPNGNPNNT DKLIDNNGKP GLDQRLILDG GFLELVRYGV VNAKDPVIKN SVMLIDNQNL 660
  661 EDNLRVKYQF TAKDGSKVPG YRRYGNDGYG EDTVTGLSYA EKGDTENQRG RVWPFFTGER 720
  721 GHYELALAKA NDTLTPDTKK VLINTYVQGM ETFANQGLML PEQAWDGVGN ATRYNYKMGQ 780
  781 GTNTATPLAW THAEYVKLVR SMTDEKVWDF YPVVQQTLAK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle