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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114564903, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVIRYVTPL MSLCLVACQT TDRPDPQTAK AALNESRQQA EASQAITPPP AAMPEDVQRE  60
   61 LNGNNVLSQS ARALPAERRF DVSANEVDAR VFFPSLVKDT PLSVAVHPDV QGKISLSLKA 120
  121 VTLSEAIQVV EDIYGYEVNR EGRILRVFPS GMRTETFPLN YIYMQREGLS LTSVSSGRIS 180
  181 DQNNNSSNGS NNSNSNSSNS SSNSNSSNGN SNSSDNTNGT FIRSTTKTDF WGELQATLMS 240
  241 IMGETGGGRQ VVVTPQAGLV TVRAFPDELR QIRSFLQIAE SHLQRQVILE AKIIEVTLSD 300
  301 GYQQGIQWEN VLGHAGSTNI DFSTSAGQGL SNAITSAIGG VTSINFTGSD FSTIINLLDT 360
  361 QGDVDVLSSP RVTASNNQKA VIKVGNDEYF VTDVSSTTVA GTTPVTTPQV ELTPFFSGIA 420
  421 LDVTPQIDEY GNVILHVHPS VIDVTSQTKE IKISDSTLEL PLAQSEIRES DTVIRAASGD 480
  481 VVVIGGLMKS ENIETVSKVP LLGDIPFLGE AFTSRTKSKK KTELIIMLKP TVVGGDTWKD 540
  541 ELKRSQDLIE RWYPSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle