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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83372478, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMDDQNKN LILATGLSFL VIMVWFFLFP PPEAVTEGET TVATQQTAVA PSATPDAPTT  60
   61 AVPPDAELPE TQRVVIDTPR LQGSISMLGG RLDDLSLKSY HETLDPQSQI VRLLSPVGQP 120
  121 NAYYALYGWT PAGALGYEDV PGANTTWTQV GSGALGVDQP VTLQWDNGKG LVFTRTISVD 180
  181 DHYMFSVAQT VENNSGQAVQ LAPYGIVARH GKPLNLQNFF VLHEGVVGRA DGKLTETKYD 240
  241 KVAELPQVAR EGAQAEVIDA QQDGWIGFTD KYWMTTLIPQ QGQPFTSVTK YVPGADIYQA 300
  301 ETREQLVTVA PGATAEVSSR LFAGAKEWET IRAYQNEGAT EPTEGAEPIP GFIDSIDWGW 360
  361 FFFLTKPIFT VLHWLNHMIG NMGLAIIALT FLLKALVLPL AYKSYVSMAR MKELQPELEA 420
  421 LRERAGDDKM LMQREMMRLY KEKQVNPAAG CLPILIQIPI FFSLYKVIFV TIELRHAPFF 480
  481 GWLKDLSAPD PSSIFNFFGL APWAAPTPGT TMALIFIGAL PILLGVSMWL QQKLNPAPGD 540
  541 KAQAMIFAWM PWVFMFMLGH FASGLVLYWI VNNLITFTQQ YVIMRSHGHH PDIFGNIKAS 600
  601 FSRKPAAQPA GKAANDGAAP AKKRKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle