YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114332591, gi...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLTSYRRP QYWKVNSSDI KSLRGKNRGM TLLEVIVALA VFSIAAVSVT KSLGEQMANM  60
   61 PILEERTLAQ WVASNQMVDV RLPGTFPDIG QKTGQSELAG REWYWRQEVI KTTDDKFRMI 120
  121 RISVSDDDKF KRVVAQVSSY VHNKA

Type	Start	End	Confidence
Cytoplasmic	1	29	0.74
Transmembrane Helix	30	49	0.76
Non-Cytoplasmic	50	145	0.93