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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69164849, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPTEPDLQL KSPIQRNYNR AVFYTYIGVI VMALLTAGIM FERQKEQQIQ QREEQVARHV  60
   61 MQIDLLLESS IRAVKSLRDV AVDHLRLGEF VRKERLPEYE KFNEDGQYFT LEPNYANSGV 120
  121 PFTNMGRITG AGSLDDRSES FYQELEMLFE LSLSFPVAKE AAPKASSIYY ISNRRMMSFY 180
  181 PWENNDLRFR DELLNKKQFQ LSTPSMNPQR SVFWSEAYID SAHQGLITTL GLPVYLEDEF 240
  241 IGSINLDMTL SSLDKQIRTY FKMPGTVILL DQQNNILSHS DFDSSEMNKV YHISQRIPAE 300
  301 LHSLSESELF DAHEGILRNG YYIHSVALHN APWRLLYLQD EDDLFKDSWD KLQLSFLLVV 360
  361 LALSLLVTIV HWQTRRAFVS PASRLLTHLE ACSQTPIRPP EKITRGWEPW FALVSRIFEE 420
  421 NRQYTHHLAE QNKRLDNLVA RRTQRLRETT ERREREFALL RSLIDSIPEA IVFKDKEGKY 480
  481 LGCNKSAERM LGYTENEIIG LTSSEVVSPE QGLRIGEEDN KVLTQQHSLR YQERVNIEGK 540
  541 PVLLDTFKLP FYNRRGDLLG LISVWRDITR EYEAAEQLRM SEQRYHLAMD AVEDGLWDWY 600
  601 IDSEQIICNP AFYSMLGYQA NEFPPLLESI DELYHPDDRE RVQEYRAQYV RDPVGTYEIE 660
  661 FRMRGKNGLY FWVLSRGRAV EFSEDGCSKR MLGTHKDITR QKSNEVALLE AKQDAELANM 720
  721 YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTVQQQDYL NKAGFSAQSL LRIINDILDF 780
  781 SKIEAGKLEL ERVAFPLDKV LDHVIDINAI KAQEKGVELL LYAPVTAGLI LYGDPLRLGQ 840
  841 VIVNLLSNAV KFTQTGEVEL GCEDVGERDD RITMKFWVRD TGIGISKDQQ AMLFDAFSQA 900
  901 DGSTTRKYGG TGLGLSISKH LVSMMGGTMQ VESELGSGSI FSFTISFEIA EEQVIAPLVV 960
  961 PEQLNNLTTL VVDDNPSALQ IYSTLMTDFS FGVNTADSGQ KALDILRKKP VDLLLLDWMM1020
 1021 PEMNGCDVIK AIDEMVADGS IAKRPIIILM TAYAAEPLDH ELQKNSVYAV LQKPFKASAL1080
 1081 FDEIINAFAK EPKLNAMPVI IEAEPAKASG LVLLVEDNFI NQQVASELLK SAGYEVVIAD1140
 1141 NGQVALDVID SKPFDAVLMD IQMPVMDGLT ATAELRKRYS KQQMPIIAMT AHAMSGDKEK1200
 1201 SLAAGMNAHI TKPIVLTELF ETLSHWIAYK HNHKDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle