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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114563647, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRNIMLIPI GIGVGLTSLS LGMVRALERK GVKVQFFKPI AQIRSGDTGP ERSTTILSTS  60
   61 PTVNPLEPYS MVHAEALIRS EQTDVLLEQI IARAAECASN TEILVVEGLV PTRSHPFADD 120
  121 INYEIAKALD ADVIFIATPG NDTPNGLMNR LEIAFNSWGG QKNKRLIGAI INKIGAPVDN 180
  181 EGRTRPDLSE VFDDKNMNAV DSSGMFQLPG KSPLRILGSV PYNLELIAPR ASDLAKHLNA 240
  241 KIINAGEMHT RRMRRVTFCA RSLPNMVTHI KTNSLLVTSG DRSDVIVSAC LAAMNGVKIG 300
  301 ALLLTGGYPP EPEIMKLCEQ AFETGLPVFL IDSNTWQTSL NIQRFDHEVP VDDAVRVEKV 360
  361 QEYVASHIDQ TWIESVTQDS PREHRLSPPA FRYKLTELAR AARKTIVLPE GEEPRTVKAA 420
  421 SICAERGIAR CVLIGNREEI LRVASQQDVI LGEGIEIIEP ESVREKYVEP MLELRRSKGL 480
  481 TEVVAREQLE DNMVLGTMML AQDEVDGIVS GAIHTTAHTI RPPLQLIKTA PGSSLVSSIF 540
  541 FMLMPDQVLV YGDCAINPDP NPEQLADIAI QSAESAKAFG IEPRVAMISY STGTSGTGSD 600
  601 VDKVREATRI AKEKRPDLII DGPLQYDAAV MPNVALSKAP DSPVAGKATV FVFPDLNTGN 660
  661 TTYKAVQRSA DLISIGPMLQ GMRKPVNDLS RGALVDDIVY TIALTAIQAA QNSAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle