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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114335300, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHKTKNVLL AGLSAFIILT TQAHAVTPTP QMIEQFKQLP KSEQERVARQ YGLDPSMLSG  60
   61 SANSSVSVTN PTVVEPRQNQ SSQQSDTAKK NEYDFKQDSD KNELKRFGYE MFSGEPTTFA 120
  121 PVTDVPVPSD YMVGPGDVIK VQLYGKESNE YSLTINRDGT VQIPDLGPVS VAGLSFSDLR 180
  181 QELSKRIKQQ MIGIESNITM GELRSIRIFI AGDAYKPGSY TVSSLSTITQ ALFVAGGVNE 240
  241 IGSLRNVQVK RSGKLIGSFD LYDLLLRGDA SGDINLRSGD VVFIPSIGGL VSVAGEVQRP 300
  301 AIYELKKNET IADVINMAAG IKQGAYPRNS SIERYNANGL KSIINVDLTS VSGNNTLAKA 360
  361 GDYIRVKNAS NQYEDAITIV GAVVRPGKYQ WKQQRISDVL PSIWGDLLLS ADLDYGLVVR 420
  421 EINKHGDIET LQFAPGEAIT SPNSIQNIAL QPRDKIMIFN FSDDTQNRFE LNSLVKKRVS 480
  481 KVESLKGDSL LDADLFKAGF ETLDNTVASK YTNQIAGVAL NGQASEEQTL VSSEVAKMLS 540
  541 NLFEDRDLIK LSNVMSRKEL LYPIVTKLTQ QGNSQHGIMI VAIAGKIRHP GVYPLTNSAK 600
  601 VTDLVKAAGG LLEGAYVERA ELTRTHTTST ISDIIHKQIN LYAAINGNQE DNIELKGRDM 660
  661 VTILTTPEWQ ERKVIEVKGE VKFPGTYNIR RGETLSDVIA RAGGYTEYAY PSAAVFVRES 720
  721 VRMQEQIEIK KLADQLRRDI ATRGVSKDGL SISYSDAQLM LTDLENIKAV GRLVIDLNAL 780
  781 KLGIKEADVQ LEDSDVLYVP TIKQTVAVMG EVQHPSTHRF KDGLTLDDYL VMSGGPRERG 840
  841 DEDRVYVIKA DGSVMMPTQS IWFNTDSQIT AGDTVIVPLD TEYKDNLTLW SQVTQIIYNT 900
  901 AVAFAAVSGI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle