YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69165393, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNKLVGAI TLTAAGVFSA ASMAAIDPTL PIYEKTSGVS GNLSSVGSDT LANMMTLWAE  60
   61 EFKHIYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEVEAFEKH YGYQPTAVRV 120
  121 AIDALAVFVH KDNPITGLSI EQIDAIFSST HKCGGKEINR WGDAGLDGNW AAKDVQLYGR 180
  181 NSVSGTYGYF KEKALCKGDF RPNVNEQPGS ASVVQSVSQS LNAIGYSGIG YKTAGVKAVA 240
  241 ISKKGDKFIE ATAANAADGT YPLSRYLYVY VNKHPNKDLS PMDREFLRFV LSKQGQQIVE 300
  301 KDGYVPLPTS VITKDLEKVG IKL

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	323	0.99