YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69165347, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHYCISTTFF YSRSMTVISR LFGYFEEGFL NLLITLMTLL VFGEVIARFF FNTGFLWIQE  60
   61 LTLTLCGWFV LFGMSYGVKV GAHIGVDAFV SKLSGKPQKA VAIFACLCCI IYCGMFLKGA 120
  121 WDYLSQMYQI GIPMEDIDFP AWFIHQLDPD FAWETLRIDI EDGAVPIWLS QSILIIGFSM 180
  181 LTWRFIELFI AILRNKAVGF QLADEAKDSM HLIDEAALST SSEQLEKNDK EAK

Type	Start	End	Confidence
Cytoplasmic	1	27	0.87
Transmembrane Helix	28	47	0.88
Non-Cytoplasmic	48	60	0.68
Transmembrane Helix	61	80	0.89
Cytoplasmic	81	99	0.87
Transmembrane Helix	100	121	0.93
Non-Cytoplasmic	122	166	0.95
Transmembrane Helix	167	186	0.91
Cytoplasmic	187	233	0.96