YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69165680, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLIALVT LLPSLAMAAS GHSVHLERAN VDLHDKASLE RGLDSFQHYC SGCHSTQYQR  60
   61 YERVATDLGI SNDDMRNKYM FTGAKIGDLM ENAIPTPDAA KWFGAAPPDL TLVARVRGAD 120
  121 WVFSYLKGFY ADETRPFGVN NTVFPSVGMP HVLQDLQGLA TVTKDEAGNA SLVKDKDGNL 180
  181 VTTGGKLTAE EYDQVVRDIT GFLVYSAEPV QLEREALGWW VLGFLFIFFI IAYLLKKEYW 240
  241 KDVH

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	215	0.99
Transmembrane Helix	216	235	0.97
Cytoplasmic	236	244	0.94