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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69950755, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKELSALA SPLSQGQVDK LKQLTSELSS VQLAWVSGYL AASANQGQGS VETTAETSAA  60
   61 PTVTILYGSQ TGNGRGVAKE LAAKAQAQGY AVNLASMGEY NVRQLKQETI LLLVVSTHGE 120
  121 GEAPDDAIEL HKFLSSKRAP KLDKLHYSVL ALGDSSYEFF CQTGKDFDAR LSALGATSLL 180
  181 PLVECDVDYE DISQQWQDSV VEAVKPYIQA SSASVVSIGT ASIAGESEYT KQNPYTAEVL 240
  241 VSQKITGRDS DRDVRHVEID LGESGLTYQV GDALGVWFSN NEVLVDEVIA ALGLAADDDV 300
  301 TVSKQSLSLK AALTDKKELT QLYPGLVKTW AELSGNAELA AISEDKEQTR QFILKHQLAD 360
  361 LVAIYPAKVS AVQLVDMLRP LTPRLYSIAS SQAEVEAEVH LTVALVEDER QGQARFGGAS 420
  421 HFLASAEEGQ QVNVYVEPNN HFRLPENPET PVIMVGPGTG VAPFRAFMQQ RAVDGVSGDS 480
  481 WLFFGNPHFE QDFLYQVEWQ QYLKNGNLSR LDVAFSRDQA HKVYVQHRIA EQAEALWQWL 540
  541 QNGAHVYICG DAERMAKDVH QALVNIAVEQ GGLSADDAEA YFETLRSEKR YQKDVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle