YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83360458, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFMDDQNKN LILATGLSFL VIMVWFFLFP PPEAVTQDEP ATVATQETAL APSATPDAPM  60
   61 TAVPPDAELP ETPRVAIDTP RLQGSISMLG GRIDDLSLKS YHETLDPGSQ IVRLLSPVGE 120
  121 PNAYYALYGW TPAGALDYED VPGANTTWTQ VGGATLGVDQ PVTLEWDNGQ GLVFTRTISV 180
  181 DDHYMFTISQ TVENRTGEAV RLAPYGIVAR HGKPLNLQNF FVLHEGAVGR ADGELTETNY 240
  241 DDIAELPQVA REGALAEVVE AQQDGWIGFT DKYWMTTLIP QQGQPFSSVT KYVPGADIYQ 300
  301 AETREQLVTV APGGTAEVSS RLFAGAKEWE AIRAYQNEGA IEPTEGAEPI PGFIDSIDWG 360
  361 WFFFLTKPIF AVLHWLNQMI GNMGLAIIAL TFLLKALVLP LAYKSYVSMA RMKELQPELE 420
  421 ALRERAGEDK MLMQREMMRL YKEKQVNPAA GCLPILIQIP IFFSLYKVIF VTIELRHAPF 480
  481 FGWLTDLSAP DPSSIFNFFG LAPWAAPTPG STMALIFIGI LPILLGISMW LQQKLNPAPT 540
  541 DKAQAMIFAW MPWVFMFMLG HFASGLVLYW IVNNVITFSQ QYVIMRSHGH HPDLFGNIKA 600
  601 GFSRKSAAQG AGKAANDSRP PAAKKRKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle