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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69949276, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIYTDSLI IGAGLAGLRV AIATKERGLD TLVLSLIPAK RSHSAAAQGG MQASLGNTVK  60
   61 GMGDNEDIHF QDTVKGSDWG CDQDVARMFA HCAPKAIREL TNWGVPWSRI SAGPRDVIMN 120
  121 AKKVTLHEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAVDNQAIS MGIPVHERIE 180
  181 ALSLIHDGKR CHGVIARCLV TGELRAYVAK STTIATGGYG KIYEISTNAT ICEGIGQALA 240
  241 LETGVATLGN MEAVQFHPTA IVPAGILTTE GCRGDGGILR DKDGHRFMPD YEPEKKELAS 300
  301 RDVVSRRMTE HIRKGKGDDS PYGPHLWLDI TILGREHIET NLREVKEICE YFLGIDPCKE 360
  361 WIPVRPTQHY SMGGVRTNAT GESPQLKGLF SVGEAACWDM HGFNRLGGNS VAETVVGGMI 420
  421 IGKYVADFCE QNALEIDTAL TQKFLDKLQN EIDNLVDGKG TENPFEIKKE MQRIMMNYVG 480
  481 IFRNGPELDK AIAELKALLL RAKNLGLKCK KRHSNPELVE ALRVTRMLKV ALTVACGAAA 540
  541 RTESRGAHSR EDYPQRNDKD WLNRTLATWP NDESLEPVLH YEKLDVMKME LPPGYRGYGN 600
  601 DNNIAHPDTE KRTQEINKIT AELGDAPDRH ALQQALMPYT LPSHLQPANE RLSDTLAVIP 660
  661 SQPVGNKSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle