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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114561952, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNKILLAI GMASSVAIVG CGDDTQYGKT PQPDPQPEVV TPPLQAFAPN GTLKVQIRRT  60
   61 QYGVPHITAD NLESLGFGNG YAQAQDNLCV IADGFIKANS ERSMYFGPHA SIDFTTGLPT 120
  121 SEDNGNLISD FAYKALKIRQ LAENQYPQFS YNSRALMEGF SAGYNQYLAD VEAGTQTGEP 180
  181 FCAGQPWVKP ISGVDVASYL FSIALLPGAA NFLDLIFYAN PGDAQEYLPR IVGPAPSTAQ 240
  241 TAFVQDMNNK LIARSATITT PETNPRNLGS NGWGLGKDKT ENGKGMVLGN PHFPHTGNLR 300
  301 FWQSHLTIPG QMDVMGGSLA GMPGLVNIGF NKDVAWTHTF STAEHFVMYN LELVAGDRLQ 360
  361 YMYDNSPMPI NKETVSVLVN AGPAGMLVAQ KDIYTTAKGP MVEAPPTLAP FGWDDGQAFF 420
  421 IQDANMANKD PLDHWLAMNL ASNKDEFQQA FKNYDGVIFN NTMYADKEGN AFYIDDSTVP 480
  481 GFSDIVVDII KTTPAIQAAR AQAGFTILPG NTSVFSYDSP MPYERAPKLE RTDFVQNSNN 540
  541 SFWSTNLAAP LENYSPLYGP ERGQLSLRTR MGLTLMEDAA GDDGKFNIEE LEAALLSNRA 600
  601 YLAELVLPDL ISQCEQQGAT PVMVSATLSK DVSASCAALK AWNGKQDNDS KGGALLREFA 660
  661 HQFNQNTMLT EAFDYMSAAT TPNKLNTDGS ALVALAHAAL NLEAAGFAVD VALGDVQFVE 720
  721 KSLPDGTASG VKLPWPGSHN AEGGFNVFST SLSGDDTLIP QHKYSPVMDV VSGNATASGL 780
  781 TAEGYQVRYG SSWMMTVSFT DDGPKAKGIL TYSESSNVLS PSFSDQSELY SSTKQLRPLL 840
  841 FTEAEIQASV ESSIELTLQK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle