YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83368512, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRDLRIYAA VAAGSSLGAV ARHLCGLWVL ELAGGGFPWG TLAVNVAGSF LIGLYATLTG  60
   61 PEGRLLASPA RRQFVMTGFC GGFTTFSVFS LETLFLLERQ DYALAAAHVG ASVLLWLSAV 120
  121 WLGSRIGARL NRPRGA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.94
Transmembrane Helix	7	30	0.85
Non-Cytoplasmic	31	36	0.84
Transmembrane Helix	37	58	0.91
Cytoplasmic	59	73	0.89
Transmembrane Helix	74	96	0.92
Non-Cytoplasmic	97	103	0.86
Transmembrane Helix	104	124	0.95
Cytoplasmic	125	136	0.92