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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94972021, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVELGVQ GMTCASCVGR VERGLKKVEG VESAVVNLAT ERATVAYDPE KTSPQALLDK  60
   61 VKDVGYEPIV GHMELGVQGM TCASCVGRVE RALKKVEGVL DASVNLATER ATVTYLPSGV 120
  121 SPGQLKAAVR EAGYDVLEEQ AGVSREDQER EAREREVNHL RRQVQFSAVF AIPLLLIAMV 180
  181 PMLVPAVNDW LMTTFGHGVM TTLNWVMLAL ALPIQFGPGL RFYRLGWKSL KNRSPDMNAL 240
  241 VMIGTTAAFL YSLVATVAPG IFPEGTAHVY YEASGVVITL ILLGKYFEAI AKGRSSEAMK 300
  301 KLLSLQAKTA RVVRNGQELE LPTDEVLVGD LISVRPGEKI PVDGEVVQGA SFVDESMITG 360
  361 EPVPVSKQPG APVVGGTINQ NGALTFRATR IGADTALAQI IKLVETAQGS KPPIQGLADR 420
  421 VVAVFVPVVL GIAALTFLLW LILGGQTALS FALITTVAVL IIACPCAMGL ATPTSIMVGT 480
  481 GKAAELGVLF KGGGALEGLQ DVRVVAVDKT GTLTKGKPEL TDLVTAPRFD RAEVLQLVAA 540
  541 AEEQSEHPIA RAIVDAARKE GIADLKPESF EAVPGYGLEA RVDGHLVQVG ADRYMTRLGL 600
  601 DVNVFAAQAE RLGDEGKSPL YAAVDGQLAA VIAVADPIKK GSQEAVNALH HMGLKVAIIT 660
  661 GDNARTASAI ARQLGIDEVL AEVLPSGKSE AVKELQAKGQ KVAFVGDGIN DAPALAQADV 720
  721 GLAIGTGTDV AVETADVILM SGDLRGVPNA FALSRATLRN IRLNLFWAFA YNIVLIPVAA 780
  781 GVLYPAFGIL LSPVLAAAAM GFSSVFVLSN ALRLRGFRPP VRPEGVSTGA PSTTPARA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle