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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66780411, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTIELGVQ GMTCASCVGR VERGLSKVPG VEVASVNLAT ERATVTYDPA VTTPQVLLDK  60
   61 VKEVGYEPLV SHLELGVQGM TCASCVGRVE RALKKVDGVL DASVNLATER ASVSFLHGVN 120
  121 TGQLKAAIRE AGYEVLEEQA GLSREEQERE VRAQEVNHLR RQVQFSALFA IPLMIIAMAP 180
  181 MLIPAVEDWM MTTFGHGVMG TLNWVMLALA IPIQFGPGRR FYRLGWKSLK SKSPDMNALV 240
  241 MIGTTAAFLY SLVATVAPGI FPEGTAHVYY EASGVVITLI LLGKYFEAIA KGRSSEAMKK 300
  301 LLSLQAKTAR VVRNGQELEL PTDEVLVGDV ISVRPGEKIP VDGEVISGNS FVDESMITGE 360
  361 PIPVNKQSGA GVVGGTINQN GALSFKATKI GADTALAQII KLVETAQGSK PPIQGLADKV 420
  421 VAVFVPIVLV IAALTFLAWM IFGGQTALSF ALITTVAVLI IACPCAMGLA TPTSIMVGTG 480
  481 KAAELGVLFK GGSALEGLQD VRVVAVDKTG TLTKGRPELT DLETAPGFNR HAVLKLVAAA 540
  541 EEQSEHPIAR AIVDAAKREG VALVKPESFE AVPGYGLEAQ VDGQRVQVGA DRYMTKLGLD 600
  601 VNAFAPQAQQ LGDEGKSPLY AAIDGQLAAI IAVADPIKEG SQEAVNALHR LGLKVAMITG 660
  661 DNGRTANAIA RQLGIDEVLA EVLPSGKSEA VQALQAKGHK VAFVGDGIND APALAQADVG 720
  721 LAIGTGTDVA VETADVILMS GDLRGVPNAF ALSRATLKNI KFNLFWAFAY NALLIPVAAG 780
  781 LLYPAFGWLL SPVLAAAAMG FSSVFVLSNA LRLRGFKPPV SVTPVPQATP AQLQHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle