YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66780950, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHRKLRELT VSALGLGCMG MSEFYGEADE QESIRVIHRA LDLGVTFLDT ADMYGVGRNE  60
   61 ELVGRAIRGR RDEVVLATKF GNVRGPNGER LGINGRPEYV RQACDASLKR LGVDHIDLYY 120
  121 QHRVDPDTPI EETVGAMAEL VHAGKVRFLG LSEASAATLR RANAVHPITA LQSEYSLWTR 180
  181 DPEEEVLPTC RELGIGFVAY SPLGRGFLSG QFRSPEDLPA DDFRRHNPRF QGENFQKNLR 240
  241 LVEAVQDMAR EKGCTASQLA LAWLLAQGND IVPIPGTKRV KYLEDNLGAL DVHLNADDLA 300
  301 QLEAVFPMGA AAGERYPDMS SVNR

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	324	0.99