YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66781233, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.55
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPWTREEMAA RAARELQDGY YVNLGIGLPT LVANHIPEGM SVWLQSENGL LGIGPFPTED  60
   61 EVDPDLINAG KQTVTALPGA SFFSSADSFA MIRGGHINLA ILGAMQVSEK GDLANWMIPG 120
  121 KMVKGMGGAM DLVAGVQRVV VLMEHVAKGD APKILPECTL PLTGKGVVDR IITDLAVLDV 180
  181 TSGGLKLVEL APGVTLDELR AKTAAEIQV

Type	Start	End	Confidence
Cytoplasmic	1	18	0.52
Transmembrane Helix	19	36	0.50
Non-Cytoplasmic	37	209	0.79