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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69935079, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDRIVGMGR AAAIVLAAGC IGVPAAAQDA AIFDVMDRIH PVWAESGMVS AQERLAAEIG  60
   61 RDIMARGGNA VDAGVAVAFA LAVTLPRAGN IGGGGFMLVH DAETGQTHAI DYREMAPRGA 120
  121 SRDMFLDAKG EADSEKSLYS GAASGVPGTV AGMKLALDRY GSMDWAEVIA PAIRLAEEGI 180
  181 TVTPELADSI EAEREHLEKF PSSAKIFFKE GGAAYRPGDR LVQADLAATL KKIAAEGPDG 240
  241 FYKGEVAEAI ARSVQEAGGL ITVEDMAAYQ PILREPVRGT YRGHEVVSMP PPSSGGVHLI 300
  301 QILNALEGYP IGALGQNSGE TIHLMAEAMK LAYADRSEYL GDPDFVDVPV AALTGKDYAV 360
  361 EMRRKISADF ATPSVMIKPA DLAPYESDQT THFSVVDKDG SAVSNTYTIN LNYGSGLVAE 420
  421 GTGVLMNNEM DDFSAKPGVP NAFGLVGGDA NAVEPGKRPL SSMTPTMVLK DGKVWLVTGS 480
  481 PGGARIITTV LQVIMNMIDH GMNVAEASTA PRIHHQWLPD ELRVEEGISL DTIRILQAKG 540
  541 HGVAVKEAMG STQSIMRDPA TGTLYGASDP RRPDAATLGY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle