YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RL16_CLOB8
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMPKRVKHR KVQRGRMKGK ATRGNFLAYG DYGIQALTCG WITSNQIESA RIAINRYIKR  60
   61 GGKLWIKIFP DKPVTEKPAE TRMGSGKGSP EYWVAVVKPG RVLFELSGVP EETAREAMRL 120
  121 ASHKLPVKTK FVSKRDFEEM GGEE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.57
Transmembrane Helix	21	42	0.55
Non-Cytoplasmic	43	144	0.99