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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|150017788, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKIIIVGG VAGGASTAAR LRRLDENVDI IMVEKGEYIS FANCGLPYYI GETIDERGKL  60
   61 IVQTVEEMSS KFNLDIRNLN EVISIDKENK KVKINNYRTN EEYEETYDIL VLSPGAAPLK 120
  121 PVILGINECD NLFTLRNIPD TDKIKSYVDN NKPKHVTVIG GGFIGLEMAE NLHARGIDIT 180
  181 LVEAGEQVMA PLDIEMASII HEHLIDKNVE LILKDGVSAF ESKGKKIILS SGKEITTDMI 240
  241 ILSIGVKPET TIAREANLNL NERGAIVVDK FMKTSDPSIY ALGDAVEVMD FVNKKPTMIP 300
  301 LAWPANRQGR IVADNICGKN TEYKGTLGSS VAKVFDYTVA TTGNNEKILK RLGIAYETIH 360
  361 IHPGSHAGYY PGSFPIAFKL LFDPKSGKIF GAQGVGLDGV EKRIDVLSAA IKGNFTVFDL 420
  421 QDFEPCYAPP YNSAKDPVNM LGYYASNIIE GFEKTIQWNE IDKLDKEKSL IIDVREEFEL 480
  481 VTGGFDNSIH IPLGQLRSRL NEIPKDKNIY VTCQVGLRGY VACRILEQNG IRCANIDGGV 540
  541 KTYLYVKRAE ESIKNQYENN EEIKDEVAVM KLEDLDITEI NANTTLNACG LQCPGPIKRV 600
  601 FEEIKKMEDG NILEVKASDP GFAKDIKSWC DSTGNTLLKS EFDNKEKAFI AYIQKGASAS 660
  661 LSKNASSPNV VGKNGATLVV FSGDLDKAIA SFIIATGAAS MGKEVTVFFT FWGLNILKSA 720
  721 DKPSVSKDMM EKMFDFMLPA HPGKLPLSQM NMMGMGPAMI KQIMKKHNVD NLETLIKNAI 780
  781 DMGVKVVACS MSMDLMGIKK EEFIDGVEIG GVASYLGATE DSGLNLFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle