YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82748419, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLKYFISEN MKINHTFVKK LVWIAPIMVI LLSGFLASNY FQVDIYNWWY TLILPGAISL  60
   61 GSCLLSRIDG YMKNKAVISL PVDLDKIWIA KILVGVKNIA ISCIVIFIAG ELSVFFIKMD 120
  121 SISHISMLSG LAGTLVIIIT SMWQVPLYFF LGNKIGLFPT IVLSLAVNIF SIVMAVKEFW 180
  181 WINPFSYTSR LMCPILKLLP NGLIAKPESQ TFTPELLKSW GIPLGIGISI VLFILITYLT 240
  241 AKWYDRQEAK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	41	0.93
Non-Cytoplasmic	42	47	0.83
Transmembrane Helix	48	68	0.92
Cytoplasmic	69	92	0.85
Transmembrane Helix	93	110	0.92
Non-Cytoplasmic	111	123	0.67
Transmembrane Helix	124	145	0.89
Cytoplasmic	146	154	0.75
Transmembrane Helix	155	176	0.91
Non-Cytoplasmic	177	219	0.94
Transmembrane Helix	220	241	0.93
Cytoplasmic	242	250	0.91