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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82747986, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENRNRVNK RSGGGFGGGP MGSFAGPKVK AKDFKGTLKR LLNYLKPQRM NFILVFIFAI  60
   61 ASTIFNIVGP KISGKAITRL VEGLVGKFTV MSQNAALLKA GKPGNIPVPG IDFQYIGDIL 120
  121 LLLLGLYVIS TLFGFLQQYI MAGVAQKTVY NLRKEVEDKI SRLPLKFFDS RTHGEILSRV 180
  181 TNDVDNISTT LQQSLTQLIT SIVTIVGVII MMLTISPIMT LVVILTLPLY IVITTLVAKH 240
  241 SQKFFAAQQK EVGELNGHVE EMYTGHKIVK VFGHEKDSIK EFENINDRLY KAGWKAQFIS 300
  301 GIIMPMMRFV SNIGYVIVCV VGGYLATLGK ISIGDIQAFI QYSNQFTQPI VQTANIANII 360
  361 QSTVASAERV FELLDEVEEI PDATDAKIIE FPKGEVKFDN VDFSYKPEEP LIEDMNLDVK 420
  421 KGHTIAIVGP TGAGKTTLVN LLMRFYEINS GKIMIDGVDI RDIKRGALHN MFGMVLQDTW 480
  481 LFNGTIMDNI AYGREGATEE EVIQAAKAAH AHHFIKTLPD GYNTILNEEA SNISQGQKQL 540
  541 LTIARAILAN PTIMILDEAT SSVDSRTEVY IQKAMTELMK GRTSFVIAHR LSTIRDAELI 600
  601 LVMNKGSIIE MGNHNELLAK KGFYADLYNS QFSGANLDSE VM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle